Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | SLIN_RS06050 | Not Available | + | 1501127 - 1501591 | 17509.8 |
| sensor histidine kinase kdpd | SLIN_RS06055 | A0QTK3 | - | 1501588 - 1502886 | 48423.9 |
| rhamnogalacturonan acetylesterase | SLIN_RS06060 | Q00017 | - | 1503034 - 1503876 | 31390.9 |
| rida family protein | SLIN_RS06065 | Not Available | + | 1504055 - 1504531 | 16972.5 |
| d-ta family plp-dependent enzyme | SLIN_RS06070 | Not Available | + | 1504535 - 1505650 | 40387.8 |
| trans-aconitate 2-methyltransferase | SLIN_RS06075 | B4EZ30 | - | 1505733 - 1506542 | 29983.5 |
| aldose epimerase family protein | SLIN_RS06080 | Not Available | - | 1506786 - 1507949 | 42316.9 |
| l-ribulose-5-phosphate 4-epimerase arad | SLIN_RS06085 | Q5PJ61 | - | 1508087 - 1508785 | 26073.9 |
| alpha-n-arabinofuranosidase | SLIN_RS06090 | Q59219 | - | 1508876 - 1510417 | 57090.2 |
| l-arabinose isomerase | SLIN_RS06095 | A9B689 | - | 1510503 - 1511993 | 55301.5 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)