Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | SLIN_RS05900 | P55195 | - | 1459555 - 1460646 | 40657.7 |
| head gin domain-containing protein | SLIN_RS05905 | Not Available | - | 1460802 - 1461500 | 24505.8 |
| abc transporter atp-binding protein | SLIN_RS05910 | Q58206 | + | 1461789 - 1462475 | 25543.6 |
| aminotransferase class iv | SLIN_RS05915 | Not Available | - | 1462452 - 1463285 | 31266.4 |
| tolc family protein | SLIN_RS05920 | Not Available | + | 1463367 - 1464860 | 53821.6 |
| efflux rnd transporter periplasmic adaptor subunit | SLIN_RS05925 | Not Available | + | 1464933 - 1466348 | 50871.6 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | SLIN_RS05930 | Q0TPK0 | + | 1466745 - 1467749 | 36911.7 |
| hypothetical protein | SLIN_RS05935 | Not Available | + | 1467841 - 1468080 | 8570.61 |
| rna polymerase sigma factor | SLIN_RS05940 | Not Available | + | 1468191 - 1468778 | 22919.3 |
| s1c family serine protease | SLIN_RS05945 | A5W8F5 | + | 1468845 - 1469858 | 37758.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)