Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | SLIN_RS05850 | Not Available | + | 1449076 - 1450617 | 55786.2 |
| nucleoside triphosphate pyrophosphohydrolase | SLIN_RS05855 | Q9X015 | + | 1450722 - 1451561 | 32179.1 |
| metallophosphoesterase | SLIN_RS05860 | Not Available | + | 1451612 - 1452355 | 28222.8 |
| hypothetical protein | SLIN_RS05865 | Not Available | + | 1452610 - 1452891 | 10587.5 |
| imp dehydrogenase | SLIN_RS05870 | O67820 | - | 1453023 - 1454495 | 52428.8 |
| duf2141 domain-containing protein | SLIN_RS05875 | Not Available | - | 1454645 - 1455079 | 15995.2 |
| single-stranded-dna-specific exonuclease recj | SLIN_RS05880 | O32044 | + | 1455120 - 1456874 | 64910.1 |
| lps export abc transporter atp-binding protein | SLIN_RS05885 | P45073 | + | 1457025 - 1457756 | 27193.0 |
| dna repair protein reco | SLIN_RS05890 | A6GWB0 | - | 1457841 - 1458533 | 26481.9 |
| fumarylacetoacetate hydrolase family protein | SLIN_RS05895 | D4GP28 | + | 1458621 - 1459457 | 31130.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)