Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS05750 | Not Available | + | 1428764 - 1429273 | 18459.4 |
| hypothetical protein | SLIN_RS05755 | Not Available | + | 1429329 - 1429718 | 13757.2 |
| sorbosone dehydrogenase family protein | SLIN_RS05760 | Not Available | - | 1429807 - 1431282 | 54298.0 |
| plastocyanin/azurin family copper-binding protein | SLIN_RS05765 | Not Available | - | 1431357 - 1432433 | 39800.2 |
| methylmalonyl co-a mutase-associated gtpase meab | SLIN_RS05770 | P37895 | - | 1432463 - 1433452 | 35763.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SLIN_RS05775 | Q8A0U8 | - | 1433507 - 1434235 | 26380.6 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | SLIN_RS05780 | Q11QL8 | - | 1434307 - 1435350 | 39289.4 |
| hypothetical protein | SLIN_RS05785 | Not Available | - | 1435468 - 1435830 | 13371.4 |
| duf1080 domain-containing protein | SLIN_RS05790 | Not Available | - | 1435987 - 1436631 | 24002.7 |
| atp-binding protein | SLIN_RS05795 | Not Available | + | 1439295 - 1440383 | 40702.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)