Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS05700 | Not Available | - | 1409281 - 1409715 | 16124.4 |
| duf4286 family protein | SLIN_RS05705 | Not Available | + | 1409850 - 1410152 | 11776.9 |
| mmpl family transporter | SLIN_RS05710 | Not Available | - | 1410196 - 1412586 | 88575.2 |
| glycosyltransferase | SLIN_RS05715 | Not Available | + | 1413176 - 1415443 | 85201.0 |
| glycoside hydrolase family 130 protein | SLIN_RS05720 | Not Available | + | 1415575 - 1417065 | 56170.8 |
| bt_3987 domain-containing protein | SLIN_RS05725 | Not Available | - | 1417167 - 1418027 | 30799.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | SLIN_RS05730 | Not Available | - | 1418091 - 1419590 | 54832.4 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS05735 | Not Available | - | 1419615 - 1422869 | 117576.0 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS05740 | Not Available | + | 1423621 - 1426836 | 116832.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | SLIN_RS05745 | Not Available | + | 1426933 - 1428378 | 52885.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)