Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | SLIN_RS05650 | Q8A128 | + | 1400946 - 1402178 | 45996.8 |
| hypothetical protein | SLIN_RS05655 | Not Available | + | 1402603 - 1403217 | 21413.5 |
| hypothetical protein | SLIN_RS05660 | Not Available | + | 1403323 - 1403949 | 21906.1 |
| alpha/beta fold hydrolase | SLIN_RS05665 | Not Available | + | 1403969 - 1404688 | 26360.7 |
| aspartate aminotransferase family protein | SLIN_RS05670 | Q8PX16 | + | 1404843 - 1405976 | 40847.0 |
| duf433 domain-containing protein | SLIN_RS05675 | Not Available | + | 1406003 - 1406251 | 9456.17 |
| duf5615 family pin-like protein | SLIN_RS05680 | Not Available | + | 1406248 - 1406598 | 13464.4 |
| n-acetylornithine carbamoyltransferase | SLIN_RS05685 | Q8A1E9 | + | 1406650 - 1407612 | 35741.8 |
| acetylglutamate kinase | SLIN_RS05690 | Q11QI8 | + | 1407605 - 1408387 | 27776.7 |
| c40 family peptidase | SLIN_RS05695 | P0AFV6 | - | 1408441 - 1408986 | 19996.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)