Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | SLIN_RS05500 | Q6AJD2 | + | 1366121 - 1367716 | 60237.0 |
| hypothetical protein | SLIN_RS05505 | Not Available | + | 1367879 - 1368211 | 11184.7 |
| abc transporter atp-binding protein | SLIN_RS05510 | P54591 | + | 1368425 - 1369297 | 32161.9 |
| hypothetical protein | SLIN_RS05515 | Not Available | + | 1369294 - 1370094 | 30254.9 |
| gntr family transcriptional regulator | SLIN_RS05520 | P54590 | + | 1370097 - 1370474 | 14594.3 |
| hypothetical protein | SLIN_RS05525 | Not Available | + | 1370471 - 1371157 | 25592.8 |
| ybcc family protein | SLIN_RS05530 | C1DDM9 | + | 1371948 - 1374443 | 95273.5 |
| proton-conducting transporter membrane subunit | SLIN_RS05535 | P05510 | + | 1374453 - 1376324 | 71249.3 |
| duf4260 domain-containing protein | SLIN_RS05540 | Not Available | + | 1376543 - 1376887 | 12644.8 |
| alpha-l-fucosidase | SLIN_RS05545 | C3YWU0 | - | 1376908 - 1378347 | 54959.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)