Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-alanine--d-alanine ligase | SLIN_RS05450 | A4G8T6 | - | 1357954 - 1359609 | 60947.9 |
| nifu family protein | SLIN_RS05455 | Not Available | - | 1359797 - 1360063 | 9455.52 |
| mrp/nbp35 family atp-binding protein | SLIN_RS05460 | P53383 | - | 1360105 - 1361208 | 39384.9 |
| gscfa domain-containing protein | SLIN_RS05465 | Not Available | - | 1361256 - 1362272 | 39000.8 |
| 50s ribosomal protein l9 | SLIN_RS05470 | Q11RW8 | - | 1362480 - 1362923 | 16019.4 |
| 30s ribosomal protein s18 | SLIN_RS05475 | Q11RW9 | - | 1363022 - 1363273 | 9591.8 |
| 30s ribosomal protein s6 | SLIN_RS05480 | A6KWD7 | - | 1363276 - 1363650 | 14335.2 |
| hypothetical protein | SLIN_RS05485 | Not Available | - | 1363762 - 1364703 | 35181.0 |
| yggs family pyridoxal phosphate-dependent enzyme | SLIN_RS05490 | O66631 | + | 1364886 - 1365545 | 24551.8 |
| duf423 domain-containing protein | SLIN_RS05495 | P39619 | + | 1365638 - 1366015 | 13270.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)