Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | SLIN_RS05400 | Q11UV9 | + | 1345137 - 1346438 | 48705.0 |
| 16s ribosomal rna | Not Available | Not Available | + | 1347010 - 1348526 | Not Available |
| hypothetical protein | SLIN_RS05410 | Not Available | + | 1348528 - 1348725 | 7259.7 |
| 23s ribosomal rna | Not Available | Not Available | + | 1348739 - 1351570 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 1351694 - 1351804 | Not Available |
| (2fe-2s)-binding protein | SLIN_RS05425 | Not Available | + | 1351931 - 1352422 | 17403.0 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | SLIN_RS05430 | Q51698 | + | 1352425 - 1354578 | 77740.1 |
| grea/greb family elongation factor | SLIN_RS05435 | Q92FZ5 | + | 1355030 - 1355545 | 18647.3 |
| endonuclease/exonuclease/phosphatase family protein | SLIN_RS05440 | Not Available | + | 1355639 - 1356715 | 41944.8 |
| gfo/idh/moca family oxidoreductase | SLIN_RS05445 | Q6M0B9 | + | 1356858 - 1357889 | 37889.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)