Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4160 domain-containing protein | SLIN_RS05350 | Not Available | - | 1333455 - 1333679 | 8815.65 |
| spfh domain-containing protein | SLIN_RS05355 | Not Available | + | 1333939 - 1335891 | 71674.9 |
| abc transporter atp-binding protein | SLIN_RS05360 | O31707 | + | 1336010 - 1337764 | 63843.1 |
| abc transporter atp-binding protein | SLIN_RS05365 | Not Available | + | 1337748 - 1339511 | 65029.7 |
| sterol desaturase family protein | SLIN_RS05370 | Not Available | - | 1339521 - 1340453 | 36892.9 |
| hypothetical protein | SLIN_RS05375 | Not Available | + | 1340667 - 1341251 | 21006.6 |
| branched-chain amino acid aminotransferase | SLIN_RS05380 | P39576 | - | 1341344 - 1342414 | 39999.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SLIN_RS05385 | O34899 | - | 1342518 - 1343096 | 21712.0 |
| hypothetical protein | SLIN_RS05390 | Not Available | + | 1343282 - 1343791 | 19145.8 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SLIN_RS05395 | A1TZN6 | + | 1343784 - 1345013 | 45837.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)