Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone groes family protein | SLIN_RS05300 | Not Available | - | 1321565 - 1321939 | 14024.9 |
| membrane protein insertion efficiency factor yidd | SLIN_RS05305 | C1D6H9 | - | 1322072 - 1322281 | 7710.51 |
| prolipoprotein diacylglyceryl transferase | SLIN_RS05310 | B3QZ04 | + | 1322367 - 1323212 | 32233.9 |
| dpp iv n-terminal domain-containing protein | SLIN_RS05315 | D4APE2 | + | 1323415 - 1325556 | 80036.0 |
| m1 family metallopeptidase | SLIN_RS05320 | Not Available | + | 1325617 - 1327275 | 63588.5 |
| s8 family peptidase | SLIN_RS05325 | Q45670 | - | 1327408 - 1328808 | 48177.1 |
| carbohydrate kinase family protein | SLIN_RS05330 | D9TT10 | - | 1328933 - 1329880 | 33990.3 |
| mfs transporter | SLIN_RS05335 | Q9FE59 | - | 1330003 - 1331517 | 55525.2 |
| bama/tama family outer membrane protein | SLIN_RS05340 | Not Available | + | 1331654 - 1333090 | 55601.8 |
| hypothetical protein | SLIN_RS05345 | Not Available | - | 1333093 - 1333458 | 14270.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)