Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS05250 | Not Available | - | 1308940 - 1309635 | 25764.8 |
| aminotransferase class v-fold plp-dependent enzyme | SLIN_RS05255 | Not Available | - | 1309795 - 1310886 | 40842.6 |
| phosphoglycerate dehydrogenase | SLIN_RS05260 | P43885 | - | 1310967 - 1312871 | 70368.7 |
| yhet family hydrolase | SLIN_RS05265 | P45524 | - | 1312940 - 1314022 | 40660.6 |
| acyl-coa dehydrogenase | SLIN_RS05270 | Q0AVM4 | - | 1314197 - 1316017 | 66765.5 |
| duf2911 domain-containing protein | SLIN_RS05275 | Not Available | + | 1316264 - 1316794 | 18990.9 |
| hypothetical protein | SLIN_RS05280 | Not Available | + | 1317039 - 1317905 | 32286.7 |
| sdr family oxidoreductase | SLIN_RS05285 | A8C7S1 | - | 1317917 - 1318801 | 33017.0 |
| sialate o-acetylesterase | SLIN_RS05290 | P82450 | + | 1318911 - 1320869 | 71534.0 |
| duf4174 domain-containing protein | SLIN_RS05295 | Not Available | - | 1321058 - 1321495 | 16907.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)