Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | SLIN_RS05150 | Not Available | - | 1285966 - 1286961 | 36728.3 |
| methionyl-trna formyltransferase | SLIN_RS05155 | A6LCS5 | - | 1287135 - 1288046 | 33341.8 |
| transcription elongation factor grea | SLIN_RS05160 | B3ESB4 | + | 1288385 - 1288858 | 17059.6 |
| hit family protein | SLIN_RS05165 | P0A5B6 | + | 1288962 - 1289354 | 14281.5 |
| tagaturonate reductase | SLIN_RS05170 | O34354 | - | 1289469 - 1290977 | 56221.3 |
| sugar kinase | SLIN_RS05175 | D4GR05 | - | 1291205 - 1292197 | 35778.4 |
| mfs transporter | SLIN_RS05180 | P42237 | - | 1292242 - 1293591 | 50034.5 |
| mannonate dehydratase | SLIN_RS05185 | B0URI0 | + | 1293690 - 1294889 | 44570.9 |
| glucuronate isomerase | SLIN_RS05190 | A6L4U4 | + | 1294965 - 1296377 | 54139.9 |
| alpha/beta fold hydrolase | SLIN_RS05195 | O31581 | + | 1296387 - 1297238 | 31812.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)