Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | SLIN_RS05000 | Q57124 | - | 1234963 - 1238076 | 114398.0 |
| efflux rnd transporter periplasmic adaptor subunit | SLIN_RS05005 | Not Available | - | 1238125 - 1239297 | 41139.9 |
| coa pyrophosphatase | SLIN_RS05010 | Q99P30 | - | 1239720 - 1240346 | 23673.6 |
| nad(p)/fad-dependent oxidoreductase | SLIN_RS05015 | Q05627 | - | 1240467 - 1242044 | 57332.8 |
| glycoside hydrolase family 88 protein | SLIN_RS05020 | O34559 | + | 1242306 - 1244240 | 72519.3 |
| gmc oxidoreductase | SLIN_RS05025 | Not Available | - | 1244291 - 1246012 | 64242.8 |
| acyl-coa dehydrogenase family protein | SLIN_RS05030 | Q2KHZ9 | + | 1246255 - 1247463 | 44681.9 |
| glycosyltransferase | SLIN_RS05035 | Not Available | - | 1247536 - 1248762 | 46398.3 |
| pled family two-component system response regulator | SLIN_RS05040 | Q9TLQ4 | - | 1248975 - 1249400 | 16209.6 |
| atp-binding protein | SLIN_RS05045 | E5KK10 | - | 1249749 - 1250864 | 41804.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)