Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine dehydratase | SLIN_RS04950 | A1B8Z2 | + | 1226393 - 1227340 | 33645.7 |
| duf3368 domain-containing protein | SLIN_RS04955 | Not Available | - | 1227373 - 1227834 | 17064.0 |
| upf0175 family protein | SLIN_RS04960 | Not Available | - | 1227827 - 1228054 | 8094.64 |
| gnat family n-acetyltransferase | SLIN_RS04965 | Not Available | + | 1228097 - 1228504 | 15620.6 |
| duf3471 domain-containing protein | SLIN_RS04970 | Not Available | + | 1228561 - 1228923 | 12709.1 |
| sorbosone dehydrogenase family protein | SLIN_RS04975 | Not Available | + | 1228980 - 1230296 | 47575.1 |
| hypothetical protein | SLIN_RS04980 | Not Available | - | 1230365 - 1232050 | 62124.1 |
| rna polymerase sigma factor | SLIN_RS04985 | Q06198 | - | 1232040 - 1232642 | 22947.2 |
| hypothetical protein | SLIN_RS04990 | Not Available | + | 1232817 - 1233512 | 26115.7 |
| glycoside hydrolase family 88 protein | SLIN_RS04995 | T2KLZ3 | - | 1233576 - 1234757 | 44940.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)