Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mevalonate kinase | SLIN_RS04900 | Q8U0F3 | - | 1215768 - 1216880 | 40271.1 |
| ygit-type zinc finger protein | SLIN_RS04905 | Not Available | - | 1216877 - 1217104 | 8158.76 |
| sugar mfs transporter | SLIN_RS04910 | Q2YIJ8 | - | 1217109 - 1218329 | 43176.0 |
| gfo/idh/moca family protein | SLIN_RS04915 | Not Available | - | 1218512 - 1219888 | 50303.8 |
| mbl fold metallo-hydrolase | SLIN_RS04920 | P9WKP2 | - | 1220034 - 1221140 | 41693.0 |
| 6-carboxytetrahydropterin synthase | SLIN_RS04925 | Q9R1Z7 | + | 1221417 - 1221848 | 16644.5 |
| gtp cyclohydrolase i fole | SLIN_RS04930 | A5FHM7 | + | 1221811 - 1222584 | 28540.9 |
| sdr family nad(p)-dependent oxidoreductase | SLIN_RS04935 | P0DKI3 | + | 1222723 - 1223424 | 24551.8 |
| aldehyde dehydrogenase (nadp(+)) | SLIN_RS04940 | Q08IB7 | - | 1223492 - 1225102 | 56060.8 |
| sugar phosphate isomerase/epimerase | SLIN_RS04945 | Not Available | - | 1225228 - 1226154 | 33849.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)