Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps assembly lipoprotein lpte | SLIN_RS04850 | Not Available | - | 1202491 - 1203057 | 21233.3 |
| sigma-54 dependent transcriptional regulator | SLIN_RS04855 | P09133 | - | 1203047 - 1204429 | 51642.1 |
| radical sam protein | SLIN_RS04860 | B3ES11 | - | 1204519 - 1206045 | 57394.2 |
| bama/tama family outer membrane protein | SLIN_RS04865 | Not Available | - | 1206283 - 1208940 | 100648.0 |
| rna methyltransferase | SLIN_RS04870 | P94538 | + | 1208939 - 1209685 | 27412.4 |
| cytochrome-c peroxidase | SLIN_RS04875 | Not Available | + | 1209720 - 1211600 | 69664.2 |
| queuosine precursor transporter | SLIN_RS04880 | Not Available | - | 1211604 - 1212392 | 28978.5 |
| hypothetical protein | SLIN_RS04885 | Not Available | - | 1212468 - 1213877 | 53974.3 |
| 30s ribosome-binding factor rbfa | SLIN_RS04890 | Q11P01 | + | 1214084 - 1214464 | 14548.4 |
| abc transporter permease | SLIN_RS04895 | P0ADC5 | + | 1214550 - 1215758 | 44541.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)