Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | SLIN_RS04800 | Q2HJ98 | - | 1193265 - 1193876 | 23028.7 |
| m48 family metallopeptidase | SLIN_RS04805 | P36163 | + | 1194103 - 1194930 | 30077.1 |
| adp-forming succinate--coa ligase subunit beta | SLIN_RS04810 | A5FHX8 | - | 1195058 - 1196275 | 43589.9 |
| abc transporter atp-binding protein | SLIN_RS04815 | Q11SW8 | + | 1196424 - 1197086 | 24166.9 |
| doxx family protein | SLIN_RS04820 | Not Available | - | 1197376 - 1197804 | 16153.2 |
| chaperonin groel | SLIN_RS04825 | Q11U19 | - | 1198003 - 1199640 | 57862.6 |
| co-chaperone groes | SLIN_RS04830 | Q8A6P7 | - | 1199717 - 1200013 | 10521.7 |
| hypothetical protein | SLIN_RS04835 | Not Available | + | 1200262 - 1200969 | 27116.9 |
| preprotein translocase subunit secg | SLIN_RS04840 | Not Available | - | 1201040 - 1201444 | 13343.4 |
| hypothetical protein | SLIN_RS04845 | Not Available | - | 1201531 - 1202373 | 31255.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)