Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | SLIN_RS04750 | Not Available | + | 1181467 - 1182495 | 37983.9 |
| gfo/idh/moca family protein | SLIN_RS04755 | B5F3F4 | + | 1182568 - 1183725 | 43019.9 |
| m14 metallopeptidase family protein | SLIN_RS04760 | Not Available | + | 1183959 - 1186757 | 102805.0 |
| spy/cpxp family protein refolding chaperone | SLIN_RS04765 | Not Available | - | 1186900 - 1187352 | 17372.0 |
| hypothetical protein | SLIN_RS04770 | Not Available | - | 1187363 - 1187827 | 17231.0 |
| rna polymerase sigma factor | SLIN_RS04775 | P44790 | - | 1187897 - 1188469 | 22403.7 |
| transketolase family protein | SLIN_RS04780 | Q58092 | - | 1188555 - 1189508 | 34185.1 |
| transketolase | SLIN_RS04785 | Q58094 | - | 1189648 - 1190505 | 31157.9 |
| thioredoxin-dependent thiol peroxidase | SLIN_RS04790 | Q83CY8 | - | 1190609 - 1191058 | 16751.8 |
| m23 family metallopeptidase | SLIN_RS04795 | Not Available | - | 1191129 - 1193198 | 76616.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)