Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | SLIN_RS04700 | Not Available | + | 1162323 - 1163759 | 53240.6 |
| psd1 and planctomycete cytochrome c domain-containing protein | SLIN_RS04705 | Not Available | + | 1163938 - 1166268 | 87499.2 |
| duf1501 domain-containing protein | SLIN_RS04710 | Not Available | + | 1166274 - 1167728 | 54251.8 |
| c-type cytochrome domain-containing protein | SLIN_RS04715 | Not Available | + | 1167844 - 1170033 | 80978.7 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS04720 | Not Available | + | 1170280 - 1173483 | 116156.0 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS04725 | Not Available | + | 1173572 - 1175089 | 55619.7 |
| c-type cytochrome | SLIN_RS04730 | Not Available | + | 1175353 - 1178061 | 100045.0 |
| duf1080 domain-containing protein | SLIN_RS04735 | Not Available | + | 1178135 - 1178914 | 28934.6 |
| aldose 1-epimerase family protein | SLIN_RS04740 | Not Available | + | 1179025 - 1180086 | 38869.0 |
| class i mannose-6-phosphate isomerase | SLIN_RS04745 | Not Available | + | 1180108 - 1181325 | 45467.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)