Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS04490 | Not Available | - | 1089918 - 1090199 | 10773.8 |
| efflux rnd transporter permease subunit | SLIN_RS04495 | Not Available | - | 1090538 - 1093669 | 114909.0 |
| efflux rnd transporter periplasmic adaptor subunit | SLIN_RS04500 | Not Available | - | 1093722 - 1094822 | 40388.9 |
| response regulator transcription factor | SLIN_RS04505 | Not Available | + | 1095127 - 1095798 | 25636.9 |
| hamp domain-containing sensor histidine kinase | SLIN_RS04510 | Not Available | + | 1095802 - 1097247 | 53795.8 |
| two-component regulator propeller domain-containing protein | SLIN_RS04515 | Not Available | + | 1097432 - 1100686 | 122105.0 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | SLIN_RS04525 | Not Available | - | 1101661 - 1102917 | 46188.1 |
| padr family transcriptional regulator | SLIN_RS04530 | Not Available | + | 1103241 - 1103579 | 12507.2 |
| abc transporter permease | SLIN_RS04535 | Not Available | + | 1103822 - 1106206 | 88665.2 |
| voc family protein | SLIN_RS04540 | Not Available | + | 1106298 - 1106693 | 14710.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)