Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | SLIN_RS04340 | Not Available | - | 1060217 - 1061191 | 38218.2 |
| transposase | SLIN_RS04345 | Not Available | - | 1061205 - 1061525 | 12224.6 |
| hypothetical protein | SLIN_RS04350 | Not Available | - | 1061761 - 1062207 | 17163.0 |
| hypothetical protein | SLIN_RS04355 | Not Available | - | 1062191 - 1062925 | 27485.8 |
| peptidase domain-containing abc transporter | SLIN_RS04360 | Q933I3 | - | 1062928 - 1065243 | 87688.5 |
| glycosyltransferase family a protein | SLIN_RS04365 | Not Available | - | 1065294 - 1066067 | 30121.8 |
| glycosyltransferase family 2 protein | SLIN_RS04370 | Q5XV99 | - | 1066064 - 1067047 | 37868.0 |
| gin domain-containing protein | SLIN_RS04375 | Not Available | - | 1067090 - 1067845 | 27200.8 |
| 2og-fe(ii) oxygenase | SLIN_RS04380 | Q5UP57 | - | 1067911 - 1068924 | 38831.3 |
| tonb-dependent receptor | SLIN_RS04385 | Not Available | - | 1068936 - 1071356 | 90005.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)