Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ydei/ompd-associated family protein | SLIN_RS04240 | Not Available | - | 1040908 - 1041363 | 16240.7 |
| rna polymerase sigma factor | SLIN_RS04245 | Not Available | + | 1041545 - 1042180 | 24939.9 |
| fecr family protein | SLIN_RS04250 | Not Available | + | 1042240 - 1043358 | 41959.1 |
| tonb-dependent receptor | SLIN_RS04255 | Not Available | + | 1043470 - 1046823 | 121763.0 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS04260 | Not Available | + | 1046844 - 1048355 | 56125.6 |
| tim barrel protein | SLIN_RS04265 | Not Available | + | 1048625 - 1049524 | 33500.5 |
| res family nad+ phosphorylase | SLIN_RS04270 | Not Available | - | 1050256 - 1050723 | 18299.9 |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | SLIN_RS04275 | Not Available | - | 1050740 - 1051009 | 10074.3 |
| hypothetical protein | SLIN_RS04280 | Not Available | - | 1051194 - 1051451 | 9781.55 |
| res family nad+ phosphorylase | SLIN_RS04285 | Not Available | - | 1051769 - 1052245 | 18354.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)