Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS04085 | Not Available | - | 1010598 - 1011095 | 19742.4 |
| esterase | SLIN_RS04090 | Not Available | - | 1011545 - 1012750 | 44576.6 |
| sensor histidine kinase | SLIN_RS04095 | Not Available | + | 1013144 - 1014286 | 43483.1 |
| response regulator | SLIN_RS04100 | Q814J1 | + | 1014286 - 1014639 | 13075.8 |
| voc family protein | SLIN_RS04105 | Not Available | - | 1014797 - 1015183 | 14945.9 |
| voc family protein | SLIN_RS04110 | P37516 | - | 1015516 - 1015905 | 14458.0 |
| mfs transporter | SLIN_RS04115 | Q7CH99 | + | 1016059 - 1017276 | 42368.0 |
| deor/glpr family dna-binding transcription regulator | SLIN_RS04120 | P18816 | + | 1017269 - 1018018 | 27370.3 |
| is3 family transposase | SLIN_RS04125 | P16940 | - | 1018487 - 1019245 | 29366.8 |
| hypothetical protein | SLIN_RS04130 | Not Available | + | 1019792 - 1020412 | 23226.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)