Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | SLIN_RS04035 | Not Available | - | 1000428 - 1002881 | 90681.9 |
| doxx family protein | SLIN_RS04040 | Not Available | + | 1003077 - 1003520 | 16515.6 |
| sensor histidine kinase | SLIN_RS04045 | Not Available | + | 1003551 - 1004612 | 41276.4 |
| lyttr family dna-binding domain-containing protein | SLIN_RS04050 | Q2YV67 | + | 1004581 - 1005288 | 27113.8 |
| tetr family transcriptional regulator | SLIN_RS04055 | Not Available | + | 1005514 - 1005729 | 8110.02 |
| multidrug efflux smr transporter | SLIN_RS04060 | P0AGC9 | + | 1006058 - 1006387 | 11642.9 |
| tryptophanase | SLIN_RS04065 | Q0C406 | + | 1006673 - 1008067 | 51028.3 |
| hypothetical protein | SLIN_RS04070 | Not Available | - | 1008327 - 1008521 | 7221.61 |
| serine hydrolase | SLIN_RS04075 | Not Available | - | 1008592 - 1009860 | 47758.8 |
| sdr family oxidoreductase | SLIN_RS04080 | Not Available | - | 1010193 - 1010375 | 6626.09 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)