Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | SLIN_RS03935 | Not Available | + | 973427 - 975043 | 59625.1 |
| amidohydrolase | SLIN_RS03940 | O34355 | + | 975119 - 976813 | 61875.6 |
| tyrosine-protein phosphatase | SLIN_RS03945 | P40289 | + | 976953 - 977693 | 27236.8 |
| moxr family atpase | SLIN_RS03950 | P94474 | - | 977778 - 978740 | 35748.1 |
| peptidylprolyl isomerase | SLIN_RS03955 | B1IGZ5 | - | 978895 - 980271 | 51266.6 |
| peptidylprolyl isomerase | SLIN_RS03960 | Q82W17 | - | 980412 - 982805 | 89341.4 |
| hypothetical protein | SLIN_RS03965 | Not Available | - | 982898 - 983599 | 25845.6 |
| hypothetical protein | SLIN_RS03970 | Not Available | - | 983631 - 983969 | 12666.7 |
| agmatine/peptidylarginine deiminase | SLIN_RS03975 | A4XP44 | - | 984121 - 985182 | 39890.2 |
| had family phosphatase | SLIN_RS03980 | Q9LDD5 | - | 985303 - 985980 | 24637.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)