Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | SLIN_RS03885 | Q795R8 | - | 956961 - 958187 | 44832.5 |
| dna/rna non-specific endonuclease | SLIN_RS03890 | Q502K1 | + | 958263 - 959333 | 40995.5 |
| hypothetical protein | SLIN_RS03895 | Not Available | - | 959351 - 960613 | 48102.1 |
| abc transporter permease | SLIN_RS03900 | O31712 | + | 960776 - 962014 | 43930.8 |
| atp-binding protein | SLIN_RS03905 | Not Available | - | 962069 - 964804 | 103483.0 |
| Trna-leu | Not Available | Not Available | + | 964957 - 965043 | Not Available |
| response regulator | SLIN_RS03915 | Not Available | + | 965410 - 965838 | 16297.8 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | SLIN_RS03920 | Q59931 | + | 966612 - 968234 | 59621.8 |
| atp-binding cassette domain-containing protein | SLIN_RS03925 | Q1M589 | + | 968311 - 969324 | 36781.8 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS03930 | Not Available | + | 970090 - 973347 | 120061.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)