Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase domain-containing abc transporter | SLIN_RS03835 | Q9RCG7 | + | 945441 - 947924 | 91385.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | SLIN_RS03840 | Not Available | + | 948054 - 949349 | 48316.9 |
| magnesium/cobalt transporter cora | SLIN_RS03845 | Q7M9C0 | + | 949430 - 950380 | 37093.5 |
| duf6600 domain-containing protein | SLIN_RS03850 | Not Available | + | 950527 - 951927 | 52126.7 |
| trna pseudouridine(38-40) synthase trua | SLIN_RS03855 | A6LDA7 | + | 952054 - 952812 | 29157.0 |
| abc transporter permease | SLIN_RS03860 | A5FMG4 | + | 952928 - 953809 | 32879.8 |
| duf3098 domain-containing protein | SLIN_RS03865 | Not Available | + | 953895 - 954233 | 12004.9 |
| undecaprenyl-diphosphate phosphatase | SLIN_RS03870 | P60936 | + | 954344 - 955189 | 30573.3 |
| trna pseudouridine(55) synthase trub | SLIN_RS03875 | Q9RB36 | + | 955288 - 956013 | 26673.8 |
| bifunctional riboflavin kinase/fad synthetase | SLIN_RS03880 | Q8Y7F2 | + | 956010 - 956939 | 34446.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)