Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lmo0937 family membrane protein | SLIN_RS03685 | Not Available | - | 914878 - 915114 | 8521.19 |
| response regulator | SLIN_RS03690 | P0AFJ6 | + | 915540 - 915914 | 13962.8 |
| sigma-54 dependent transcriptional regulator | SLIN_RS03695 | Not Available | + | 916016 - 917488 | 54635.7 |
| porin family protein | SLIN_RS03700 | Not Available | - | 917562 - 918206 | 22551.0 |
| response regulator | SLIN_RS03705 | Q55169 | + | 918823 - 919242 | 16114.3 |
| atp-binding protein | SLIN_RS03710 | Not Available | + | 919331 - 920809 | 55954.0 |
| duf2188 domain-containing protein | SLIN_RS03715 | Not Available | + | 921096 - 921278 | 6915.3 |
| four-helix bundle copper-binding protein | SLIN_RS03720 | Not Available | + | 921341 - 921757 | 15548.6 |
| pyridoxamine 5'-phosphate oxidase family protein | SLIN_RS03725 | Not Available | + | 921848 - 922351 | 18664.9 |
| duf3891 family protein | SLIN_RS03730 | Not Available | + | 922477 - 923208 | 27938.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)