Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | SLIN_RS03635 | Q6D8X4 | + | 897297 - 897887 | 22541.6 |
| uma2 family endonuclease | SLIN_RS03640 | Not Available | - | 897939 - 898520 | 22399.8 |
| pig-l family deacetylase | SLIN_RS03645 | Not Available | - | 898588 - 901146 | 93792.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | SLIN_RS03650 | Not Available | - | 901245 - 902675 | 51868.5 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS03655 | Not Available | - | 902723 - 905989 | 116926.0 |
| dpp iv n-terminal domain-containing protein | SLIN_RS03660 | Not Available | - | 906389 - 909406 | 110649.0 |
| sodium-translocating pyrophosphatase | SLIN_RS03665 | Q8TJA9 | + | 909641 - 912313 | 93278.8 |
| efflux rnd transporter periplasmic adaptor subunit | SLIN_RS03670 | P13510 | - | 912389 - 913477 | 39357.9 |
| ytxh domain-containing protein | SLIN_RS03675 | Not Available | - | 913759 - 914133 | 13876.0 |
| ytxh domain-containing protein | SLIN_RS03680 | Not Available | - | 914182 - 914433 | 9081.83 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)