Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | SLIN_RS03435 | Q1M7A0 | + | 857155 - 857811 | 24614.9 |
| peroxiredoxin | SLIN_RS03440 | Q54SE2 | + | 857957 - 858592 | 23520.8 |
| hypothetical protein | SLIN_RS03445 | Not Available | + | 858775 - 859020 | 8971.75 |
| gh25 family lysozyme | SLIN_RS03450 | Q8FFY2 | + | 859249 - 859908 | 25819.6 |
| putative quinol monooxygenase | SLIN_RS03455 | Not Available | - | 859929 - 860213 | 10571.7 |
| shikimate dehydrogenase | SLIN_RS03460 | Q6LYQ2 | - | 860262 - 861005 | 27577.9 |
| deda family protein | SLIN_RS03465 | P0ABP7 | - | 861081 - 861722 | 24108.4 |
| phosphosulfolactate synthase | SLIN_RS03470 | O06739 | - | 861800 - 862564 | 28820.8 |
| hotdog fold thioesterase | SLIN_RS03475 | Not Available | + | 862694 - 863137 | 15975.2 |
| hypothetical protein | SLIN_RS03480 | Not Available | + | 864147 - 866144 | 72909.5 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)