Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| family 16 glycoside hydrolase | SLIN_RS03135 | Not Available | + | 804254 - 804919 | 24817.9 |
| nad(+) synthase | SLIN_RS03140 | Q5ZMA6 | + | 805104 - 807188 | 78042.0 |
| aaa family atpase | SLIN_RS03145 | Not Available | + | 807238 - 808494 | 48451.6 |
| hypothetical protein | SLIN_RS03150 | Not Available | + | 808629 - 809258 | 24492.1 |
| dmt family transporter | SLIN_RS03155 | O29973 | + | 809270 - 810142 | 31888.0 |
| ompa family protein | SLIN_RS03160 | Not Available | - | 810231 - 811151 | 32884.5 |
| hypothetical protein | SLIN_RS03165 | Not Available | + | 811381 - 812439 | 40052.0 |
| peroxiredoxin | SLIN_RS03170 | A0R1V9 | + | 812735 - 813289 | 21095.0 |
| carboxymuconolactone decarboxylase family protein | SLIN_RS03175 | Q2IMQ8 | + | 813379 - 813966 | 21516.0 |
| c-type cytochrome | SLIN_RS03180 | Not Available | + | 814163 - 815161 | 36313.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)