Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS02935 | Not Available | - | 741831 - 743273 | 52918.7 |
| helix-turn-helix domain-containing protein | SLIN_RS02940 | Not Available | + | 743758 - 744159 | 15048.8 |
| dinb family protein | SLIN_RS02945 | Not Available | - | 744280 - 744729 | 16775.1 |
| fad-binding domain-containing protein | SLIN_RS02950 | Q9KS67 | - | 744768 - 746426 | 63775.8 |
| hypothetical protein | SLIN_RS02955 | Not Available | - | 746671 - 747969 | 47992.3 |
| neutral/alkaline non-lysosomal ceramidase n-terminal domain-containing protein | SLIN_RS02960 | Not Available | - | 748162 - 749523 | 50055.2 |
| degt/dnrj/eryc1/strs aminotransferase family protein | SLIN_RS02965 | Not Available | - | 749520 - 750932 | 51590.2 |
| gfo/idh/moca family oxidoreductase | SLIN_RS02970 | Not Available | - | 750945 - 751952 | 36189.5 |
| gfo/idh/moca family oxidoreductase | SLIN_RS02975 | Q7MWF4 | - | 752045 - 753466 | 52710.4 |
| hypothetical protein | SLIN_RS02980 | Not Available | - | 753504 - 754595 | 41896.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)