Anoxybacillus flavithermus WK1

Gram-positiveRodMotileFacultative aerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Anoxybacillaceae

Genus

Anoxybacillus

Description

Anoxybacillus spp. are facultative anaerobes found in diverse moderate- to high-temperature habitats such as geothermal hot springs, manure and processed foods such as gelatin. Anoxybacillus flavithermus is a major contaminant of milk powder and gelatin. Strain WK1 (DSM 21510) was isolated from the waste water drain at the Wairakei geothermal power station in New Zealand. The bacterium is a dark yellow color which is caused by accumulation of a carotenoid pigment in the cell membrane. It is unusual in its ability to grow in waters that are super-saturated with amorphous silica, and where opaline silica sinter is actively forming. Sinter is a deposit of opaline or amorphous silica with small cavities that occurs as an incrustation around hot springs and geysers and sometimes forms conical mounds (geyser cones) or terraces. The ability of A. flavithermus to grow in super-saturated silica solutions makes it an ideal subject to study the processes of sinter formation, which might be similar to the biomineralization processes that occurred at the dawn of life. The genome shows clear signs of genome compaction in the Anoxybacilus/Geobacillus branch, compared to other members of the family Bacillaceae. Synthesis of long chain polyamines and biofilm formation by A. flavithermus could regulate sinter formation and control the textural features of the resulting siliceous sinters. The presence of an array of c-di-GMP-related signal transduction proteins suggests that A. flavithermus could regulate biofilm formation in response to the environmental conditions (adapted from PubMed 19014707 and Encyclopaedia Brittanica). (HAMAP: ANOFW)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyAnoxybacillaceae
GenusAnoxybacillus
SpeciesAnoxybacillus flavithermus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Anoxybacillus flavithermus WK1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperature60
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Anoxybacillus flavithermus WK1


Gene Summary

Adenine Count

831582 bp

Thymine Count

825886 bp

Guanine Count

598928 bp

Cytosine Count

590350 bp

Genome Length

2846746 bp

Protein-coding Genes

2892 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+685489 - 685500Not Available
Site-specific recombinase for integration and excisionAFLV_RS03590P10429-685706 - 68711255050.2
Transcriptional regulatorAFLV_RS03595A4J5P4-687170 - 68780224024.2
helix-turn-helix transcriptional regulatorAFLV_RS03600Not Available+687974 - 6881898431.45
hypothetical proteinAFLV_RS15585Not Available+688203 - 6883615995.23
Hypothetical proteinAFLV_RS15590Not Available+688339 - 6885156920.39
hypothetical proteinAFLV_RS03605Not Available+688562 - 68896315860.4
hypothetical proteinAFLV_RS03610Not Available+688975 - 6891727098.62
AntirepressorAFLV_RS03615Not Available+689169 - 68993329316.0
Hypothetical proteinAFLV_RS03625Not Available+690166 - 69042910314.5

Displaying genes 1 – 10 of 3038 in total

Metabolites

189 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da

Displaying 1–10 of 189 metabolites