Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius DSM 17135
Accession NumberABQC00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase family 8, super-sandwich domain protein | BACPLE_03801 | Not Available | + | 4218591 - 4221665 | 116151.0 |
| nad(+)/nadh kinase | BACPLE_03802 | Not Available | - | 4221748 - 4222632 | 33278.1 |
| pyridoxine 5'-phosphate synthase | BACPLE_03803 | Not Available | + | 4222741 - 4223454 | 26477.6 |
| transporter, mota/tolq/exbb proton channel family protein | BACPLE_03804 | Not Available | + | 4223458 - 4224177 | 25859.0 |
| transport energizing protein, exbd/tolr family | BACPLE_03805 | Not Available | + | 4224235 - 4224600 | 13789.8 |
| tonb family domain protein | BACPLE_03806 | Not Available | + | 4224615 - 4225451 | 29231.9 |
| dj-1 family protein | BACPLE_03807 | Not Available | + | 4225478 - 4226026 | 19270.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | BACPLE_03808 | Not Available | + | 4226026 - 4226694 | 24412.4 |
| atp-dependent dna helicase recg | BACPLE_03809 | Not Available | + | 4226694 - 4228793 | 80576.0 |
| glycosyl hydrolase family 35 | BACPLE_03810 | Not Available | + | 4229131 - 4231437 | 86853.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
