Phocaeicola plebeius DSM 17135

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola plebeius DSM 17135 is a Gram-negative, non-sporulating rod-shaped bacterium classified within the intestinal microflora of animals. This organism is a chemoheterotroph, deriving its energy from organic compounds, and operates as an anaerobe, thriving in oxygen-depleted environments typical of the gastrointestinal tract. As a member of the animal intestinal microbiota, Phocaeicola plebeius may play a significant role in the digestive processes and overall health of its host. Its absence or imbalance could potentially disrupt normal gut function, highlighting its importance in maintaining the homeostasis of the intestinal ecosystem. Furthermore, the specific adaptation to an anaerobic lifestyle suggests that Phocaeicola plebeius may be involved in the fermentation processes, contributing to the breakdown of complex carbohydrates and the production of short-chain fatty acids, which are beneficial for host metabolism. Overall, the traits of Phocaeicola plebeius underline its specialized ecological niche and suggest potential implications for gut health and microbial interactions within the animal intestinal environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola plebeius
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola plebeius DSM 17135
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola plebeius DSM 17135

Accession NumberABQC00000000.2

Gene Summary

Adenine Count

1232116 bp

Thymine Count

1229996 bp

Guanine Count

991003 bp

Cytosine Count

968209 bp

Genome Length

4421324 bp

Protein-coding Genes

3919 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
istb-like atp-binding proteinBACPLE_03211Not Available-3547726 - 354850829303.8
integrase core domain proteinBACPLE_03213Not Available-3548495 - 355007560295.9
hypothetical proteinBACPLE_03212Not Available+3550046 - 35501955420.71
hypothetical proteinBACPLE_03214Not Available+3550268 - 355089123671.4
hypothetical proteinBACPLE_03215Not Available+3550934 - 355147319913.2
hypothetical proteinBACPLE_03216Not Available-3551559 - 35517898991.06
hypothetical proteinBACPLE_03217Not Available-3551771 - 35520018693.62
integrase family proteinBACPLE_03218Not Available-3551992 - 355241716147.3
integraseBACPLE_03219Not Available-3552442 - 35525644621.7
hypothetical proteinBACPLE_03220Not Available+3553129 - 35532635495.03

Displaying genes 3211 – 3220 of 4023 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites