Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius DSM 17135
Accession NumberABQC00000000.2
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative ribosomal protein s1 | BACPLE_02991 | Not Available | + | 3289422 - 3291206 | 66546.6 |
| antibiotic biosynthesis monooxygenase | BACPLE_02992 | Not Available | + | 3291304 - 3291579 | 10349.5 |
| hypothetical protein | BACPLE_02993 | Not Available | - | 3291711 - 3293096 | 51373.6 |
| efflux transporter, rnd family, mfp subunit | BACPLE_02994 | Not Available | + | 3293667 - 3294863 | 44782.1 |
| rnd transporter, hae1 family | BACPLE_02995 | Not Available | + | 3294887 - 3297991 | 113033.0 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | BACPLE_02996 | Not Available | + | 3298010 - 3299392 | 51456.1 |
| acetyltransferase, gnat family | BACPLE_02997 | Not Available | - | 3299458 - 3299994 | 20741.6 |
| iga peptidase m64 | BACPLE_02998 | Not Available | - | 3300016 - 3301302 | 48600.5 |
| tonb-dependent receptor | BACPLE_02999 | Not Available | - | 3301571 - 3303118 | 58756.6 |
| tonb-dependent receptor plug domain protein | BACPLE_03000 | Not Available | - | 3303106 - 3303876 | 27841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
