Phocaeicola plebeius DSM 17135

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola plebeius DSM 17135 is a Gram-negative, non-sporulating rod-shaped bacterium classified within the intestinal microflora of animals. This organism is a chemoheterotroph, deriving its energy from organic compounds, and operates as an anaerobe, thriving in oxygen-depleted environments typical of the gastrointestinal tract. As a member of the animal intestinal microbiota, Phocaeicola plebeius may play a significant role in the digestive processes and overall health of its host. Its absence or imbalance could potentially disrupt normal gut function, highlighting its importance in maintaining the homeostasis of the intestinal ecosystem. Furthermore, the specific adaptation to an anaerobic lifestyle suggests that Phocaeicola plebeius may be involved in the fermentation processes, contributing to the breakdown of complex carbohydrates and the production of short-chain fatty acids, which are beneficial for host metabolism. Overall, the traits of Phocaeicola plebeius underline its specialized ecological niche and suggest potential implications for gut health and microbial interactions within the animal intestinal environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola plebeius
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola plebeius DSM 17135
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola plebeius DSM 17135

Accession NumberABQC00000000.2

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3919 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
polygalacturonase (pectinase)BACPLE_00254Not Available+292350 - 29378953515.4
fg-gap repeat proteinBACPLE_00255Not Available+293806 - 29574371411.5
glycosyl hydrolase, family 88BACPLE_00256Not Available+295774 - 29792480620.7
succinate coa transferaseBACPLE_00257Not Available-298000 - 29949654180.0
hypothetical proteinBACPLE_00258Not Available-299540 - 29988713281.1
pp_00255BACPLE_00259Not Available+300010 - 301383Not Available
pspc domain proteinBACPLE_00260Not Available-301591 - 3017917447.22
methyltransferase domain proteinBACPLE_00261Not Available+302185 - 30282624756.9
efflux abc transporter, permease proteinBACPLE_00262Not Available+302833 - 30370232611.6
hypothetical proteinBACPLE_00263Not Available+303731 - 3039799249.69

Displaying genes 281 – 290 of 4023 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites