Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius DSM 17135
Accession NumberABQC00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00214 | Not Available | - | 231816 - 233030 | 46310.2 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | BACPLE_00215 | Not Available | - | 233280 - 234035 | 27442.3 |
| succinate dehydrogenase or fumarate reductase, flavoprotein subunit | BACPLE_00216 | Not Available | - | 234071 - 236053 | 73476.5 |
| succinate dehydrogenase cytochrome b subunit, b558 family | BACPLE_00217 | Not Available | - | 236087 - 236776 | 25967.5 |
| peptidase, s41 family | BACPLE_00218 | Not Available | - | 237039 - 238634 | 59986.7 |
| pantetheine-phosphate adenylyltransferase | BACPLE_00219 | Not Available | - | 238644 - 239144 | 19186.2 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_00220 | Not Available | - | 239134 - 241071 | 73273.1 |
| hypothetical protein | BACPLE_00221 | Not Available | - | 241093 - 242223 | 43790.3 |
| hypothetical protein | BACPLE_00222 | Not Available | + | 242443 - 242562 | 4697.81 |
| hypothetical protein | BACPLE_00223 | Not Available | - | 242539 - 243501 | 37301.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
