Erwinia tasmaniensis Et1/99

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

The genus Erwinia currently contains both pathogenic and nonpathogenic bacteria. E.tasmaniensis are nonpathogenic Erwinia isolated from fruit trees; strain Et1/99, the type strain, was isolated from apple flowers in Tasmania, Australia. It consists of a 3.9 Mb circular chromosome and five plasmids. Strain Et1/99 represents an epiphytic plant bacterium related to E.amylovora and E.pyrifoliae, which are responsible for the important plant diseases fire blight and Asian pear shoot blight, respectively. Strain Et1/99 is thought to compete with these and other bacteria when occupying the same habitat during initial colonization and may represent a strategy for controlling the early steps of fire blight. Secretion systems include the hypersensitive response type III pathway present in many pathogens. Differences or missing parts within the virulence-related factors distinguish strain Et1/99 from pathogens such as Pectobacterium atrosepticum and the related Erwinia spp. Strain Et1/99 completely lacks the sorbitol operon, which may also affect its inability to invade fire blight host plants. Erwinia amylovora in contrast depends for virulence on utilization of sorbitol, the dominant carbohydrate in rosaceous plants (modified from PubMed 18462403). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia tasmaniensis
StrainEt1/99

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Erwinia tasmaniensis Et1/99
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Erwinia tasmaniensis Et1/99

Accession NumberNC_010696.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

45 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
replication initiation proteinETA_RS00240Not Available+1 - 86733132.8
helix-turn-helix transcriptional regulatorETA_RS00245Not Available+967 - 145818465.6
hypothetical proteinETA_RS19545Not Available+1611 - 18238195.74
hypothetical proteinETA_RS00250Not Available+2024 - 22609057.93
hypothetical proteinETA_RS00255Not Available+2626 - 294911939.5
lytic transglycosylase domain-containing proteinETA_RS00260Not Available+3021 - 359621641.3
hypothetical proteinETA_RS00265Not Available+3593 - 388010002.5
virb3 family type iv secretion system proteinETA_RS00270Not Available+3924 - 423811375.3
virb4 family type iv secretion system proteinETA_RS00275Not Available+4235 - 660788575.7
type iv secretion system proteinETA_RS00280Not Available+6609 - 725624834.3

Displaying genes 1 – 10 of 3739 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017265Uridine diphosphate-N-acetylglucosamineC17H27N3O17P2Chemical structure of Uridine diphosphate-N-acetylglucosamine528-04-1
Average607.3537Da
Monoisotopic607.081569477Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da
BASm0017409PA(16:0/18:1(9Z))C37H71O8PChemical structure of PA(16:0/18:1(9Z))NULL
Average674.941Da
Monoisotopic674.488656244Da
BASm0017415PA(18:1(9Z)/18:1(9Z))C39H73O8PChemical structure of PA(18:1(9Z)/18:1(9Z))14268-17-8
Average700.979Da
Monoisotopic700.504306309Da
BASm0017417PE(14:0/16:0)C35H70NO8PChemical structure of PE(14:0/16:0)NULL
Average663.918Da
Monoisotopic663.483905216Da
BASm0017419PE(14:0/18:1(11Z))C37H72NO8PChemical structure of PE(14:0/18:1(11Z))NULL
Average689.956Da
Monoisotopic689.49955528Da
BASm0017461PS(14:0/16:0)C36H70NO10PChemical structure of PS(14:0/16:0)NULL
Average707.927Da
Monoisotopic707.473734456Da
BASm0017610N-Acetylmuramate 6-phosphateC11H19NO11PChemical structure of N-Acetylmuramate 6-phosphateNULL
Average372.2424Da
Monoisotopic372.069571967Da

Displaying 11–20 of 88 metabolites