Methylobacterium nodulans ORS 2060

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

In 2001 Methylobacterium, which had been hitherto found associated non-symbiotically with plants, was discovered to nodulate Crotalaria, a large Fabaceae group found in Africa. Strain ORS 2060 (also known as CNCM I 2342T=LMG 21967T), the type strain for this species, was isolated from nodules on C. podocarpa from the Bel-Air area, Dakar, Senegal. It is able to use C1 compounds such as methanol, formate and formaldehyde but not methylamine as its sole carbon source, as well as more complex carbon sources such as succinate, citrate, pyruvate, glutamate and ethanol. It grows as short asporogenous Gram-negative rods that occur singly or occasionally in pairs; some are motile with one or more polar flagella. Optimal growth occurs at pH 6.8-7.5 and at 30-37 degrees C. It is strictly aerobic and unpigmented (adapted from PubMed 15545469 and http://genome.jgi-psf.org/finished_microbes/metno/metno.home.html). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium nodulans
StrainORS 2060

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Methylobacterium nodulans ORS 2060
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature32
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Crotalaria
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceMethylotroph
PathogenicityNo

Genome Summary

Methylobacterium nodulans ORS 2060

Accession NumberNC_011894.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

7231 genes

Non-Coding Genes

437 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail proteinMNOD_RS09690Not Available+2107504 - 210813922658.9
Minor tail proteinMNOD_RS09695Not Available+2108136 - 210902030361.7
Gta-like proteinMNOD_RS09700Not Available+2109001 - 210945316488.6
Tail proteinMNOD_RS09705Not Available+2109450 - 2113352137789.0
Putative tail fiber proteinMNOD_RS42805Not Available+2113345 - 211501259222.2
Putative endolysinMNOD_RS09715Not Available+2115044 - 211568522320.0
Hypothetical proteinMNOD_RS48870Not Available+2115848 - 21161419369.36
Putative tail fiberMNOD_RS41335Not Available-2524496 - 252701888402.2
hypothetical proteinMNOD_RS11695Not Available-2527122 - 252851947963.5
hypothetical proteinMNOD_RS11700Not Available-2528519 - 252887211968.0

Displaying genes 71 – 80 of 8224 in total

Pathways

23 pathways

Metabolites

141 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000738D-lyxoseC5H10O5Chemical structure of D-lyxose1114-34-7
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da

Displaying 1–10 of 141 metabolites