Thermus parvatiensis str. RL

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Thermus

Description

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusThermus
SpeciesThermus parvatiensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermus parvatiensis str. RL

Accession NumberNZ_CP014141.1

Gene Summary

Adenine Count

293627 bp

Thymine Count

295528 bp

Guanine Count

640498 bp

Cytosine Count

643168 bp

Genome Length

1872821 bp

Protein-coding Genes

2011 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
zinc metallopeptidaseAV541_RS06250Not Available-1134826 - 113550624060.5
universal stress proteinAV541_RS06255Not Available-1135687 - 113610014642.8
hsp33 family molecular chaperone hsloAV541_RS06260Not Available-1136120 - 113714536784.6
cysteine--trna ligaseAV541_RS06265Not Available+1137182 - 113862754976.3
acyl-coa dehydrogenase family proteinAV541_RS06270Not Available-1138683 - 114041663213.4
thiolase family proteinAV541_RS06275Not Available-1140428 - 114162142178.1
3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family proteinAV541_RS06280Not Available-1141632 - 114392384292.1
pseudouridine synthaseAV541_RS06285Not Available-1144026 - 1146959107791.0
degv family proteinAV541_RS06290Not Available-1146987 - 114782330603.0
pyroglutamyl-peptidase iAV541_RS06295Not Available+1147875 - 114846821433.2

Displaying genes 1321 – 1330 of 2267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

24 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034561-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideNot available
Average573.2993Da
Monoisotopic573.0509381Da
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da
BASm0003763(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6PChemical structure of (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateNot available
Average285.1898Da
Monoisotopic285.0402236Da
BASm00049331-deoxy-11-oxopentalenateC15H19O3Chemical structure of 1-deoxy-11-oxopentalenateNot available
Average247.315Da
Monoisotopic247.1339681Da
BASm0004954neopentalenolactone DC15H19O4Chemical structure of neopentalenolactone DNot available
Average263.314Da
Monoisotopic263.128882672Da

Displaying 1–10 of 24 metabolites