Anaeromyxobacter dehalogenans 2CP-1

Gram-negativeRodMotileAerobe; anaerobe

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Anaeromyxobacteraceae

Genus

Anaeromyxobacter

Description

Anaeromyxobacter dehalogenans (strain 2CP-1) is a slender Gram-negative rod-shaped spore-forming soil bacterium. It is capable of a gliding motility and it forms a spore-like structure. It was first isolated by anaerobic enrichment from a Michigan soil sample on 2-chlorophenol and acetate followed by growth of single plate-grown colonies. It is the first Myxobacterium that is found capable of anaerobic respiration, wherein it is able to grow by coupling the oxidation of both acetate or hydrogen, which is a distinguishing property of the organism from other reducing populations, to the reduction of ortho-substituted halophenols, ferric iron, nitrate, nitrite, nitrous oxide, manganese oxide, uranium (VI) and fumarate. Of interest is its unique respiratory reduction of nitrate and nitrite to ammonia which is not linked to its ability to reduce nitrous oxide to nitrogen gas. These metal-reducing microorganisms are widely distributed in the environment. Anaeromyxobacter strains have been found in undisturbed and contaminated soils and sediments, and evidence shows they also exist in acidic subsurface sediments and agricultural soils. A. dehalogenans is an important model organism that exists as both as a productive dechlorinator and metal reducer. By studying the potential interferences between the competing substrates in contaminated environments we can further understand bioremediation efforts. (adapted from PubMed 11823233 and http://microbewiki.kenyon.edu/index.php/Anaeromyxobacter_dehalogenans). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyAnaeromyxobacteraceae
GenusAnaeromyxobacter
SpeciesAnaeromyxobacter dehalogenans
Strain2CP-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Anaeromyxobacter dehalogenans 2CP-1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Anaeromyxobacter dehalogenans 2CP-1

Accession NumberNC_011891.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4507 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1442409 - 1442453Not Available
tyrosine-type recombinase/integraseA2CP1_RS06450Not Available+1442562 - 144350034905.0
hypothetical proteinA2CP1_RS06455Not Available-1443610 - 14438799478.85
Gp19A2CP1_RS06460Not Available+1444094 - 144553054035.4
duf4177 domain-containing proteinA2CP1_RS23600Not Available-1445527 - 144597317077.1
Hnh endonucleaseA2CP1_RS06470Not Available-1446453 - 144678512350.8
hypothetical proteinA2CP1_RS06475Not Available-1446803 - 14470399355.21
hypothetical proteinA2CP1_RS06480Not Available-1447542 - 144786512441.9
hypothetical proteinA2CP1_RS06485Not Available-1447868 - 144815810587.8
hypothetical proteinA2CP1_RS06490Not Available+1448255 - 144861413843.5

Displaying genes 1 – 10 of 4575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

50 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034561-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideNot available
Average573.2993Da
Monoisotopic573.0509381Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da
BASm0004092UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC41H61N9O28P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1189.924Da
Monoisotopic1189.312320676Da
BASm0004093di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC87H139N7O23P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1713.045Da
Monoisotopic1711.941952079Da
BASm0004094di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC95H152N8O28P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1916.239Da
Monoisotopic1915.021324602Da
BASm0004172(R)-4'-phosphopantetheineC11H21N2O7PSChemical structure of (R)-4'-phosphopantetheineNot available
Average356.33Da
Monoisotopic356.081806356Da
BASm0004925UDP-N-acetyl-alpha-D-muramateC20H28N3O19P2Chemical structure of UDP-N-acetyl-alpha-D-muramateNot available
Average676.395Da
Monoisotopic676.080870429Da
BASm00074613-deoxy-alpha-D-manno-oct-2-ulosonateC8H13O8Chemical structure of 3-deoxy-alpha-D-manno-oct-2-ulosonateNot available
Average237.185Da
Monoisotopic237.061591Da

Displaying 21–30 of 50 metabolites