Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN06295920_102138 | Not Available | - | 901295 - 902131 | 30345.6 |
| 2,3-dihydroxybiphenyl 1,2-dioxygenase | SAMN06295920_102139 | Not Available | - | 902150 - 903148 | 36500.0 |
| 4-carboxymuconolactone decarboxylase | SAMN06295920_102140 | Not Available | + | 903180 - 903734 | 19160.0 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN06295920_102141 | Not Available | - | 903739 - 905046 | 48499.4 |
| gluconolactonase | SAMN06295920_102142 | Not Available | - | 905058 - 905990 | 34177.5 |
| l-fuconolactonase | SAMN06295920_102143 | Not Available | - | 906110 - 906985 | 31209.6 |
| hypothetical protein | SAMN06295920_102144 | Not Available | - | 907003 - 907224 | 7623.95 |
| hypothetical protein | SAMN06295920_102145 | Not Available | - | 907253 - 908623 | 51302.4 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN06295920_102146 | Not Available | - | 908627 - 909166 | 19319.8 |
| 4-carboxymuconolactone decarboxylase | SAMN06295920_102147 | Not Available | - | 909186 - 909566 | 14217.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.