Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-aminomuconate deaminase | SAMN06295920_10227 | Not Available | + | 793684 - 794109 | 15362.3 |
| 3-hydroxyanthranilate 3,4-dioxygenase | SAMN06295920_10228 | Not Available | + | 794106 - 794657 | 20531.6 |
| aminocarboxymuconate-semialdehyde decarboxylase | SAMN06295920_10229 | Not Available | + | 794657 - 795685 | 38122.9 |
| hypothetical protein | SAMN06295920_10230 | Not Available | + | 795718 - 796443 | 26928.0 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN06295920_10231 | Not Available | - | 796609 - 798360 | 63087.1 |
| (p)ppgpp synthetase, rela/spot family | SAMN06295920_10232 | Not Available | - | 798413 - 800518 | 78639.4 |
| dna-directed rna polymerase subunit omega | SAMN06295920_10233 | Not Available | - | 800684 - 801025 | 12313.4 |
| phospholipid n-methyltransferase | SAMN06295920_10234 | Not Available | - | 801124 - 801747 | 22605.0 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN06295920_10236 | Not Available | + | 802136 - 803011 | 32465.3 |
| hypothetical protein | SAMN06295920_10237 | Not Available | - | 802930 - 803130 | 7437.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.