Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coenzyme q-binding protein coq10 | SAMN06295920_101506 | Not Available | + | 517440 - 517925 | 18065.7 |
| nicotinamide-nucleotide amidase | SAMN06295920_101507 | Not Available | - | 517862 - 518398 | 18167.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase /2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN06295920_101508 | Not Available | - | 518414 - 519562 | 39231.1 |
| pp_00501 | SAMN06295920_101509 | Not Available | + | 519790 - 520791 | Not Available |
| two-component system, ntrc family, nitrogen regulation sensor histidine kinase glnl | SAMN06295920_101510 | Not Available | + | 520767 - 521888 | 39773.1 |
| two-component system, ntrc family, nitrogen regulation response regulator glng | SAMN06295920_101511 | Not Available | + | 521885 - 523342 | 52161.7 |
| two-component system, ntrc family, nitrogen regulation sensor histidine kinase ntry | SAMN06295920_101512 | Not Available | + | 523595 - 525808 | 79813.3 |
| two-component system, ntrc family, nitrogen regulation response regulator ntrx | SAMN06295920_101513 | Not Available | + | 525812 - 527203 | 51261.6 |
| rna-binding protein hfq | SAMN06295920_101514 | Not Available | + | 527399 - 527956 | 21225.9 |
| gtp-binding protein hflx | SAMN06295920_101515 | Not Available | + | 527953 - 529269 | 47461.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.