Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | SAMN06295920_11548 | Not Available | - | 4852569 - 4853837 | 44204.7 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN06295920_11549 | Not Available | - | 4853851 - 4855929 | 75190.5 |
| aromatic-amino-acid transaminase | SAMN06295920_11550 | Not Available | - | 4855949 - 4857154 | 42589.7 |
| transcriptional regulator, asnc family | SAMN06295920_11551 | Not Available | + | 4857283 - 4857750 | 17319.0 |
| iron complex outermembrane recepter protein | SAMN06295920_11552 | Not Available | - | 4857975 - 4860185 | 79286.8 |
| regulatory protein, luxr family | SAMN06295920_11553 | Not Available | + | 4860421 - 4861515 | 39995.0 |
| fatty-acyl-coa synthase | SAMN06295920_11554 | Not Available | - | 4861684 - 4863312 | 59010.0 |
| chrr cupin-like domain-containing protein | SAMN06295920_11555 | Not Available | - | 4863341 - 4863820 | 16992.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295920_11556 | Not Available | + | 4863998 - 4864783 | 26509.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295920_11557 | Not Available | + | 4864786 - 4865541 | 25896.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.