Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295920_11344 | Not Available | - | 4651180 - 4651944 | 25800.2 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN06295920_11345 | Not Available | - | 4651952 - 4652692 | 25172.1 |
| transcriptional regulator, xre family with cupin sensor | SAMN06295920_11346 | Not Available | + | 4652810 - 4653409 | 21726.1 |
| iron complex outermembrane recepter protein | SAMN06295920_11347 | Not Available | - | 4653511 - 4655733 | 81044.1 |
| kynureninase | SAMN06295920_11348 | Not Available | + | 4655905 - 4657140 | 44544.5 |
| predicted arabinose efflux permease, mfs family | SAMN06295920_11349 | Not Available | - | 4657173 - 4658558 | 48032.2 |
| catechol 2,3-dioxygenase | SAMN06295920_11350 | Not Available | - | 4658610 - 4659020 | 14197.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN06295920_11351 | Not Available | + | 4659167 - 4660717 | 55580.9 |
| acyl-coa dehydrogenase | SAMN06295920_11352 | Not Available | - | 4660753 - 4661931 | 43185.7 |
| transcriptional regulator, tetr family | SAMN06295920_11353 | Not Available | + | 4662221 - 4662904 | 25482.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.