Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ketosteroid isomerase-related protein | SAMN06295920_1124 | Not Available | + | 4495095 - 4495523 | 16265.3 |
| 4-oxalocrotonate tautomerase | SAMN06295920_1125 | Not Available | + | 4495523 - 4495732 | 7400.95 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN06295920_1126 | Not Available | + | 4495729 - 4496646 | 32875.6 |
| transcriptional regulator, marr family | SAMN06295920_1127 | Not Available | - | 4496647 - 4497108 | 17357.9 |
| 2-oxo-3-hexenedioate decarboxylase | SAMN06295920_1128 | Not Available | - | 4497167 - 4497946 | 27028.7 |
| 2-keto-4-pentenoate hydratase | SAMN06295920_1129 | Not Available | - | 4497990 - 4498799 | 27534.2 |
| hcomoda/2-hydroxy-3-carboxy-muconic semialdehyde decarboxylase | SAMN06295920_11210 | Not Available | - | 4498781 - 4499488 | 25424.5 |
| 2,3-dihydroxy-p-cumate/2,3-dihydroxybenzoate 3,4-dioxygenase | SAMN06295920_11211 | Not Available | - | 4499478 - 4500368 | 32996.0 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN06295920_11212 | Not Available | - | 4500370 - 4500891 | 19563.1 |
| 2-hydroxymuconate semialdehyde dehydrogenase | SAMN06295920_11213 | Not Available | - | 4500909 - 4502411 | 53392.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.