Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_111192 | Not Available | + | 4473456 - 4473728 | 10176.0 |
| protein of unknown function | SAMN06295920_111193 | Not Available | - | 4473747 - 4474154 | 14733.9 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN06295920_111194 | Not Available | - | 4474237 - 4475469 | 43649.1 |
| Trna-met | Not Available | Not Available | + | 4475594 - 4475670 | Not Available |
| phage integrase family protein | SAMN06295920_111196 | Not Available | + | 4475863 - 4477107 | 46717.5 |
| helix-turn-helix domain-containing protein | SAMN06295920_111197 | Not Available | - | 4477260 - 4477793 | 19732.8 |
| regulatory protein, gntr family | SAMN06295920_111198 | Not Available | + | 4478111 - 4478728 | 22945.9 |
| hypothetical protein | SAMN06295920_111199 | Not Available | + | 4478765 - 4478887 | 4491.5 |
| transglutaminase-like superfamily protein | SAMN06295920_111200 | Not Available | + | 4478936 - 4479592 | 24230.8 |
| asparagine synthase (glutamine-hydrolysing) | SAMN06295920_111201 | Not Available | + | 4479579 - 4481396 | 65445.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.